CDS
Accession Number | TCMCG006C48024 |
gbkey | CDS |
Protein Id | XP_013734544.1 |
Location | join(13149369..13149449,13149752..13149878,13149960..13150075,13150167..13150214,13150305..13150469,13150800..13150958,13151056..13152936,13153030..13153205,13153307..13153382,13153484..13153611,13153789..13153946,13154172..13154446,13154540..13154713,13154803..13154943,13155030..13156603,13161786..13162145,13162239..13162353,13162438..13162863) |
Gene | LOC106438049 |
GeneID | 106438049 |
Organism | Brassica napus |
Protein
Length | 2059aa |
Molecule type | protein |
Topology | linear |
Data_file_division | PLN |
dblink | BioProject:PRJNA293435 |
db_source | XM_013879090.2 |
Definition | DNA-directed RNA polymerase V subunit 1-like isoform X2 [Brassica napus] |
EGGNOG-MAPPER Annotation
Sequence
CDS: ATGGAAGAAGCGTCTTCCTCAGATATTCTAGAAGCAGAGATTGTTGGAATCTCATTCGCTCTTGCTACTCATCGTCAGATCCGTCTAGCATCCATTAGTGACGCTGGGATCAACCATGCTAGCCAACTCTCTAACGCATTCTTGGGGTTACCTCTGGAGTTTGGTAAATGTGAAGCTTGCGGTGCCACTGAGCCTGATAAATGTGAAGGTCATTTTGGGTATATACATCTGCCAGTGCCTATATACCATCCCGCTCATGTTAGTGAGTTGAAACAGATGCTGAGCCTTCTCTGCTTGAAGTGTCTCAAGATAAAGAAGATTAAGAGCACAAGTTCTGGGCTTGCGGAGCGCTTACTAGGCGTCTGTTGTGAGGAAGCTTCGAACATCACAATTAAAGATAAATCATCAGATGGTGCCTCATATCTTCAACTGAAGCTCCCATCTAGAACAAGACTTCAGGAGGGCTTCTGGAATTTCCTGGAAAGATACGGTTACCGCTATGGAAGCGACCATACCCGGCCCCTGCTAGCAAGAGAGGTAAAGGAAATTTTAAGACGGATTCCTGAAGAGACAAGAAAGAAGCTCACAGCAAAGGGACATATTCCTCAAGAAGGATACATCTTAGAGTATCTTCCAGTCCCGCCTAACTGTCTGTCAGTGCCAGAAGTTTCTGATGGTTCCAACTCCATGTCAGTGGATCCGTCTAGAATCGAGCTAAAAGACGTTCTCAGGAAAGTGGTAGCGATCAACAACTCTAGGTCTGGTGAGACGAACTTTGAGTCGCATAGAGCTGAAGCCAATGAAATGTTTAGAGTGGTGGATACCTATCTTCAGGTGAGGGGTACTGCAAAGCCAACAAGAAACATTGACATGAGATTCGGGGTGTCCAAGATCTCGGACAGTTCCTCCTCAAAAGCTTGGACAGAAAAGATGAGAACACTTTTCATTCGGAAAGGTTCAGGCTTCTCTTCTCGCAGCGTCATCACTGGAGATGCCTTCAGGAATGTGAATGAGGTGGGGATCCCTATGGAAATTGCACATCGGATCACATTTGAGGAGAGAGTTAGCGTCCACAACATTGGATATCTACAAGAGTTGGTGGACAACAAGATGTGCTTAAGCTATACCCAAGGTTCTACTACCTATTCTCTGAGGGACGGTTCCAAGGGGCATACAGTCCTTAAACCCGGGCAGATTGTGCATCGCAGGGTCATGGATGGAGATGTTGTGTTTATCAACCGTCCTCCCACAACACATAAGCATTCTCTGCAAGCACTTCGAGTGTATGTTCATGAAGACAACACGGTGAAGATCAATCCCCTGATGTGTAGCCCTCTCAGTGCTGATTTTGATGGTGATTGTGTCCATCTGTTCTACCCCCAGTCTCTCACAGCTAAGGCAGAGGTACTGGAGCTCTTTTCAGTGGATAAGCAACTTCGCAGCTCACATACTGGGCAGCTGATTCTGCAGCTGGGTTTGGATTCTTTGCTGTCTCTGAGGGTTATGATGGAGCAGGTGTTTTTGGACAAAGCATCTGCTCAACAGTTAGCTATGTATGGCTCTCGATCTCTCCCACCACCAGCTGTAGTGAAGTCCAGTAAATCTGGCCCGGCTTGGACATTTTTCCAGATATTGCAGCTTGCCTTTCCTGAGCGTCTTAGTTGCAGAGGGGACGGGTTCATAGTTGGTGGAAGTGATTTGCTGTCCTTTGATTTTGGGGTTGATGCGTTGGCGTCTATAATCAATGGAATTGTAACCGCAATCATGGTGGAGAAGGGTCCAAAGGAAGCACTGGCATTCTTTGATTCACTGCAGCCGCTACTGATGGAACATCTAGATCCTCAGGGATTTAGTTTAAGTCTGGAAGACTTGTCCATGTCTAGGGAAGACATGGGAGTTATTCACAATCTCATCGTCCGGGAGATTTCTCCTATGGTGTCTAGGTTGAGGTTATCGTATGAGGACGAACTCCAACTAGAGAACAGCATCCAGAAAGTGAAGGAAGTGGCTGCTAATTTCATGCTGAAGTCGTATTCGATGAGGAACTTGATCGACATCAAGAGCAACTCAGCAATAAACAAGCTGGTGCAGCAGATTGGCTTCCTGGGTCTTCAGCTTTCAGACAAGAAGAAGTTGTACACGAAGACTCTGGTGGAAGACATGGCTCAGTTTTATAAGAAAAAGTATGTCAGTACTTCTTCCTCTGGAGATTTTGGAATTGTGAAGGGCTGCTTTTTTCACGGACTTGATCCTTATGAAGAGATGGCTCATTCAGTTGCGGCAAGGGAGGTAATTGTCCGCTCTTCAAGGGGATTAGCTGAGCCTGGTACACTCTTCAAGAATCTGATGGCTGTTCTGCGAGACATAGTCATTACCAACGATGGAACTGTAAGAAATACATGCAGTAACTCCATCGTGCAGTTCAAGTATGAGCTGAGTTCTGACAATGAGAATCAAGGTTTATTTGAAGCGGGAGACCCTGTTGGAGTATTGGCAGCAACCGCCATGTCAAATCCCGCCTATAAAGCGGTGCTTGATTCTTCCCCAAATAGCAACTCTTCATGGGAACTAATGAAGGAAGTTCTACTCTGCAAAGTCAACTTCCAGAACACCACCAATGATCGGCGCGTGATTCTTTATCTGAATGAATGCCGCTGTGGGAAAAAGTACTGCCAGGAGAATTCTGCTTACACAGTTAGGAACAAGCTGAAGAAAGTTAGTCTGAAAGATACTGCAGTGGAGTTTCTAGTCGAATACAGAAAGCAACAAGCGATTTCAGAAATTTTTGGAATGGATATATGCCTACATGGCCATATTCATCTTAATAAGACATTGTTGGAAGGGTGGAACATCAGCATGCAGGACATACTTCAGAGGTGCGAGGATGCAATCAACTCACTAGTCCAAAAAAAGAAGAAGAAAGCTGAGGACTTTAAGAAAATGAATTTGTCTGTCAGTGAATGCTGCTCTTTCCGAGGTCCAGGCTCGAGCAAAGATTCTGATATGCCGTGCTTGATGTTTTCCTCCTACAATGCCACTGATCCTGATCTGGAAAGAACTCTGGATGTTCTCTGCAATACAATATACCCAGTTCTGCTCGAAACAGTGATCAAAGGTGATCCACGGATTGCCTCAGCAAATATAATCTGGAATAGTCCAGAAACGACAACCTGGATCCGGAGTCGTCATGCATCCCGCCGAGGGGAATGGGTATTGGATGTCACCGTTGAAAAATCTGATGTCAAGCAAAGTGGTGATGCATGGAGGGTTGTGATTGACTCATGTCTTTCAGTTCTTCATCTAATAGACACAAAACGGTCGATCCCATATTCCATAAAGCAAGTTCAAGAGCTGCTTGGTTTGTCCTGCGCCTTTGAGCAAGCTGTTCAGCGTCTCTCAGCTTCAGTGAGAAAGGTCTCCAAAGGAGTTCTGAAAGAACATATCATTCTCGTGGCAAACAACATGACCTGTTCAGGGGATATGCTAGGTTTCAATTCTGGAGGTTACAAGGCTTTGACTCGGTCCTTGAACATCAAAGCTCCATTCACAGAAGCAACTCTTATTGCGCCAAGGAAATGTTTCGAGAAAGCAGCTGAGAAATGCCATAAAGATTCTCTATCAACAGTAGTTGGATCTTGTTCTTGGGGAAAACGCGTGGATGTTGGTACAGGTTCACAGTTTGAGCTTCTATGGAACAAAAAAGAGACTGGTCTGGAGAATGATGATGAAACTGATGTATTCAGCTTTCTCCAGATGGTAAGATCCACCAAAACTGCAGATGCATACGTTTCTTCCCCTGGTTTTGATGTCACAGAGGAAGAAATGGCTGAATGGGCTGAGTCTCCTGAGCGAGACTCTGCTCTTGGAGAGCCCAAGTTTGATGACAGTGCTGAGTTTCAAAATCTACTTGATGAAGGCAAGGCATCGGAATCCAAGTGGGACAACGGTTCTCTTTGGGAGAATGGTTGCAGTAGTGGCTCAGAATGGGGAGTCTCGAAAAACGCAGGTGGTGAGGAGAACACGCAGTCTGGTTGGGGAAAGGCTGCAAACATTGAGAAGGAAGATGCTTCGTCTGGTTGGAACAGTAAAAAGGATGCTCAAGAAGCTACCAATACAGATTCATGGGGCGCTTGGGGATCAAAGACAAAAGATGATGCTGAAAATGCAACACCGAACTGGGGAACAAAACCAGCTCAAAATGATTCTGTTGTCATAGAAAACGGCGAGCCTTCTTCTGACGTTTGGGGACCCAAAGCTGTTTCAGACAAACCTTGGGGTAAAAAGAACTCTGAAACTGAGCCAGCTCCTGCTGCATGGGGTAAAACGAACTCTGAAAGTGAATCAGCTGCTGCTGCTTGGGGCTCTACTAACAAAAAGAACACGGGAACTGAATCAGACGCTGCTGGTTGGGGCTCTACTAACAAAAAGAACCCGGAAACTGAATCAGATGCTGGTGCTTGGGGTTCTGGGGCCAAAAACAAAGAAACAGAACCAGCTCCTGCTGCATGGGGTTCCTGGGGCAAAAAGAGCTCAGAAGCTGTATCAGGTGGTGCGGATTGGGGTAATAGGGGCAAACGGGTTTCTGAAACTGAATCAGGTGCTGGTGGTTGGGCTTCCCGGAACCCGAGCTTGGAAACTCAGTCAGGTGGTGCTACTTGGGGTTCCAGGGATAAATCTAAATTTGAAACTGAATCAGGTGGTGCTGCTTGGGGCTCGCAGGCTAAAAATAATTTTGAGAGTGAGTCAGGCTCGGGTGCTGCTGCTTGGGGTAAGAAGAAACCAGAAACTGAATCAGGTGGTGCTGCTTGGGGTTCTCAGGCTAAAAACAAATCTGAGATTGAGTCAGGCTCAGGTGCCGCTGCTTGGGGTACTTGGGACAAGAAGAAATCAGAAACCGAATCAGGTGGTGGTGCTTGGGGTTCTCAGGCTAAAAAGAACTCTGAAACTGAGTCAGGCGCATGTGCTTCTACTTGGGGTGCTTGGGACAAGAAGAAACCAGAAACTGAATCAGGTGGTGATGGTGCTGCTTGGGGTTCTCAGGCCAAAAATAATTCTGAAACTGAGTCAGGCTCAGGTGCTGCTGCTTGGGGTAAGAAGAAACCAGAAACTGAATCAGGTGGTGGTGCTGCTTGGGGTTCTCAGGCCAAAAAGAACTCTGAAAGTCAATTAGGTGCTGCTAATTGGGGTTCTAAGGACACAAACAATTCGGAAAATGGATCAGATTCTGCTGCTTGGGGTAAAAAGAAGAATTCAGAAGCTGAACCAACTTCTGTTGCTTGGGGTTCTTGGGGACAGCCAAGCCCCCCTGCTTCAGACAAGGATGCCCAAGAAGATGATGGAAACCCGTGGGTATCATTGAAGGCGACCAATAGCGGAGAGAAGGAAGGGAATGAGACAAGTCAGTGGGGAGTTCCAAACAAGAGATATCCATCTGCTGGCTCACAGTCACAGGGTGGTGGTGGCGGCGCAGATTGGAAGAGGAACCGTCCTCCTAGGACCCCTGGATCTGAGAGTATTATGGGTCCAATGTTCACAGCAACAAGACAGCGCGTAGACATGTTCACCTCTGAGGAGCAAGAGCTTCTCTCCGATGTCGATCCAGTCATGAGAAGACTCAGGAAAATAATGCATCAGTCCGGGTACACTGATGGAGAACCAATCTCGGATGAAGACAAGACATATGTACTGGAGCAGATTTTGAACTACCATCCAGAGAAAGATGCTAAGCTTGGTCCCGGTCTTGATTTCATCACGGTTGATAAGCACACAACGTTCACAGAGTCCAGGTGCTTCTTTGTTGTGTCGACTGATGGGACAAAACAAGACTTTTCATACAGGAAGTGCATCAACAACTATCTGGTGGAGAAGTTCCCAAACCTAGCTGAAGAGTTCATCGCAAAGTACTTCAGAAAGAGGGACAATGAAAACAGAGACAAGAACAGCCAAGAAGCCACACCACCTGGTGAAAAAGAGTCTCAGACTCAGCCTATTGATAATGGAAGCCAAGACTCCCAGCCTCAGTCTATTGGTAATGAAGATGGCGACACTCAGCCTCAGTCTCAAGCTGAAGACACTCAGCCTCAGTCTCAAATTGAAGACACTCAGCTTCAGTCTCAAGTTGAAGAATCTCAGCCTATTGGTAATGGAGGTGAGGACTATCAGACAGAGCCTCAGGGTTAG |
Protein: MEEASSSDILEAEIVGISFALATHRQIRLASISDAGINHASQLSNAFLGLPLEFGKCEACGATEPDKCEGHFGYIHLPVPIYHPAHVSELKQMLSLLCLKCLKIKKIKSTSSGLAERLLGVCCEEASNITIKDKSSDGASYLQLKLPSRTRLQEGFWNFLERYGYRYGSDHTRPLLAREVKEILRRIPEETRKKLTAKGHIPQEGYILEYLPVPPNCLSVPEVSDGSNSMSVDPSRIELKDVLRKVVAINNSRSGETNFESHRAEANEMFRVVDTYLQVRGTAKPTRNIDMRFGVSKISDSSSSKAWTEKMRTLFIRKGSGFSSRSVITGDAFRNVNEVGIPMEIAHRITFEERVSVHNIGYLQELVDNKMCLSYTQGSTTYSLRDGSKGHTVLKPGQIVHRRVMDGDVVFINRPPTTHKHSLQALRVYVHEDNTVKINPLMCSPLSADFDGDCVHLFYPQSLTAKAEVLELFSVDKQLRSSHTGQLILQLGLDSLLSLRVMMEQVFLDKASAQQLAMYGSRSLPPPAVVKSSKSGPAWTFFQILQLAFPERLSCRGDGFIVGGSDLLSFDFGVDALASIINGIVTAIMVEKGPKEALAFFDSLQPLLMEHLDPQGFSLSLEDLSMSREDMGVIHNLIVREISPMVSRLRLSYEDELQLENSIQKVKEVAANFMLKSYSMRNLIDIKSNSAINKLVQQIGFLGLQLSDKKKLYTKTLVEDMAQFYKKKYVSTSSSGDFGIVKGCFFHGLDPYEEMAHSVAAREVIVRSSRGLAEPGTLFKNLMAVLRDIVITNDGTVRNTCSNSIVQFKYELSSDNENQGLFEAGDPVGVLAATAMSNPAYKAVLDSSPNSNSSWELMKEVLLCKVNFQNTTNDRRVILYLNECRCGKKYCQENSAYTVRNKLKKVSLKDTAVEFLVEYRKQQAISEIFGMDICLHGHIHLNKTLLEGWNISMQDILQRCEDAINSLVQKKKKKAEDFKKMNLSVSECCSFRGPGSSKDSDMPCLMFSSYNATDPDLERTLDVLCNTIYPVLLETVIKGDPRIASANIIWNSPETTTWIRSRHASRRGEWVLDVTVEKSDVKQSGDAWRVVIDSCLSVLHLIDTKRSIPYSIKQVQELLGLSCAFEQAVQRLSASVRKVSKGVLKEHIILVANNMTCSGDMLGFNSGGYKALTRSLNIKAPFTEATLIAPRKCFEKAAEKCHKDSLSTVVGSCSWGKRVDVGTGSQFELLWNKKETGLENDDETDVFSFLQMVRSTKTADAYVSSPGFDVTEEEMAEWAESPERDSALGEPKFDDSAEFQNLLDEGKASESKWDNGSLWENGCSSGSEWGVSKNAGGEENTQSGWGKAANIEKEDASSGWNSKKDAQEATNTDSWGAWGSKTKDDAENATPNWGTKPAQNDSVVIENGEPSSDVWGPKAVSDKPWGKKNSETEPAPAAWGKTNSESESAAAAWGSTNKKNTGTESDAAGWGSTNKKNPETESDAGAWGSGAKNKETEPAPAAWGSWGKKSSEAVSGGADWGNRGKRVSETESGAGGWASRNPSLETQSGGATWGSRDKSKFETESGGAAWGSQAKNNFESESGSGAAAWGKKKPETESGGAAWGSQAKNKSEIESGSGAAAWGTWDKKKSETESGGGAWGSQAKKNSETESGACASTWGAWDKKKPETESGGDGAAWGSQAKNNSETESGSGAAAWGKKKPETESGGGAAWGSQAKKNSESQLGAANWGSKDTNNSENGSDSAAWGKKKNSEAEPTSVAWGSWGQPSPPASDKDAQEDDGNPWVSLKATNSGEKEGNETSQWGVPNKRYPSAGSQSQGGGGGADWKRNRPPRTPGSESIMGPMFTATRQRVDMFTSEEQELLSDVDPVMRRLRKIMHQSGYTDGEPISDEDKTYVLEQILNYHPEKDAKLGPGLDFITVDKHTTFTESRCFFVVSTDGTKQDFSYRKCINNYLVEKFPNLAEEFIAKYFRKRDNENRDKNSQEATPPGEKESQTQPIDNGSQDSQPQSIGNEDGDTQPQSQAEDTQPQSQIEDTQLQSQVEESQPIGNGGEDYQTEPQG |